=> Bootstrap dependency digest>=20010302: found digest-20190127 WARNING: [license.mk] Every package should define a LICENSE. ===> Skipping vulnerability checks. WARNING: No /var/db/pkg/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'. ===> Skipping vulnerability checks. WARNING: No /var/db/pkg/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'. ===> Building for py27-mol-1.5.0.1nb7 (cd /data/scratch/biology/py-mol/work/pymol/ && /usr/bin/env USETOOLS=no PTHREAD_CFLAGS=\ -pthread\ PTHREAD_LDFLAGS=\ -pthread PTHREAD_LIBS= PTHREADBASE=/usr DL_CFLAGS=\ -pthread\ DL_LDFLAGS=\ -pthread DL_LIBS= PYTHON=/usr/pkg/bin/python2.7 CC=clang CFLAGS=-O2\ -I/usr/include\ -I/usr/pkg/include/freetype2\ -I/usr/pkg/include\ -I/usr/pkg/include/libdrm CPPFLAGS=-I/usr/include\ -I/usr/pkg/include/freetype2\ -I/usr/pkg/include\ -I/usr/pkg/include/libdrm CXX=clang++ CXXFLAGS=-O2\ -I/usr/include\ -I/usr/pkg/include/freetype2\ -I/usr/pkg/include\ -I/usr/pkg/include/libdrm COMPILER_RPATH_FLAG=-Wl,-R F77=gfortran FC=gfortran FFLAGS=-O LANG=C LC_ALL=C LC_COLLATE=C LC_CTYPE=C LC_MESSAGES=C LC_MONETARY=C LC_NUMERIC=C LC_TIME=C LDFLAGS=-L/usr/lib\ -Wl,-R/usr/lib\ -L/usr/pkg/lib\ -Wl,-R/usr/pkg/lib LINKER_RPATH_FLAG=-R PATH=/data/scratch/biology/py-mol/work/.cwrapper/bin:/data/scratch/biology/py-mol/work/.buildlink/bin:/data/scratch/biology/py-mol/work/.tools/bin:/usr/pkg/bin:/usr/bin:/bin:/usr/pkg/bin:/usr/local/bin:/usr/pkg/bin:/usr/pkg/bin PREFIX=/usr/pkg MAKELEVEL=0 CONFIG_SITE= PKG_SYSCONFDIR=/usr/pkg/etc HOME=/data/scratch/biology/py-mol/work/.home CWRAPPERS_CONFIG_DIR=/data/scratch/biology/py-mol/work/.cwrapper/config CPP=clang-cpp LOCALBASE=/usr/pkg X11BASE=/usr/pkg PKGMANDIR=man PKGINFODIR=info PKGGNUDIR=gnu/ MAKECONF=/dev/null OBJECT_FMT=ELF USETOOLS=no BSD_INSTALL_PROGRAM=/usr/bin/install\ -c\ -s\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_SCRIPT=/usr/bin/install\ -c\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_LIB=/usr/bin/install\ -c\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_DATA=/usr/bin/install\ -c\ -o\ pbulkXXX\ -g\ users\ -m\ 644 BSD_INSTALL_MAN=/usr/bin/install\ -c\ -o\ pbulkXXX\ -g\ users\ -m\ 644 BSD_INSTALL=/usr/bin/install BSD_INSTALL_PROGRAM_DIR=/usr/bin/install\ -d\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_SCRIPT_DIR=/usr/bin/install\ -d\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_LIB_DIR=/usr/bin/install\ -d\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_DATA_DIR=/usr/bin/install\ -d\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_MAN_DIR=/usr/bin/install\ -d\ -o\ pbulkXXX\ -g\ users\ -m\ 755 BSD_INSTALL_GAME=/usr/bin/install\ -c\ -s\ -o\ pbulkXXX\ -g\ users\ -m\ 2555 BSD_INSTALL_GAME_DATA=/usr/bin/install\ -c\ -o\ pbulkXXX\ -g\ users\ -m\ 664 BSD_INSTALL_GAME_DIR=/usr/bin/install\ -d\ -o\ pbulkXXX\ -g\ users\ -m\ 775 INSTALL_INFO= MAKEINFO=/data/scratch/biology/py-mol/work/.tools/bin/makeinfo FLEX= BISON= PKG_CONFIG= PKG_CONFIG_LIBDIR=/data/scratch/biology/py-mol/work/.buildlink/lib/pkgconfig:/data/scratch/biology/py-mol/work/.buildlink/share/pkgconfig PKG_CONFIG_LOG=/data/scratch/biology/py-mol/work/.pkg-config.log PKG_CONFIG_PATH= CWRAPPERS_CONFIG_DIR=/data/scratch/biology/py-mol/work/.cwrapper/config /usr/pkg/bin/python2.7 setup.py install -c -O1 --root=/data/scratch/biology/py-mol/work/.destdir ) running install running build running build_py creating build creating build/lib.netbsd-9.99.67-amd64-2.7 creating build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/water_amber.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/protein_mmff.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/protein_amber.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/lst.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/models.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/protein_amber99.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/cex.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/pdb.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/bonds.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/protein_residues.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/gamess1.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/cpv.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/map.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/neighbor.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/bond_mmff.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/dictdb.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/cc1.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/mmd.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/place.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/xyz.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/io.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/sdf.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/charge.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/cif.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/bond_amber.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/arc.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/water_residues.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/mae.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/solvate.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/mol2.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/pkl.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/mass.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/gms.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/protein.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/brick.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/hetatm.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy copying modules/chempy/mol.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy creating build/lib.netbsd-9.99.67-amd64-2.7/chempy/bmin copying modules/chempy/bmin/realtime.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/bmin copying modules/chempy/bmin/util.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/bmin copying modules/chempy/bmin/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/bmin copying modules/chempy/bmin/state.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/bmin copying modules/chempy/bmin/commands.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/bmin creating build/lib.netbsd-9.99.67-amd64-2.7/chempy/champ copying modules/chempy/champ/formal_charges.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/champ copying modules/chempy/champ/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/champ copying modules/chempy/champ/assign.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/champ copying modules/chempy/champ/amber99.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/champ creating build/lib.netbsd-9.99.67-amd64-2.7/chempy/fast copying modules/chempy/fast/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/fast creating build/lib.netbsd-9.99.67-amd64-2.7/chempy/fragments copying modules/chempy/fragments/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/fragments creating build/lib.netbsd-9.99.67-amd64-2.7/chempy/tinker copying modules/chempy/tinker/realtime.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/tinker copying modules/chempy/tinker/amber.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/tinker copying modules/chempy/tinker/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/tinker copying modules/chempy/tinker/keyword.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/tinker copying modules/chempy/tinker/state.py -> build/lib.netbsd-9.99.67-amd64-2.7/chempy/tinker creating build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk copying modules/pmg_tk/SetEditor.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk copying modules/pmg_tk/Setting.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk copying modules/pmg_tk/PMGApp.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk copying modules/pmg_tk/ColorEditor.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk copying modules/pmg_tk/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk copying modules/pmg_tk/Demo.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk copying modules/pmg_tk/PyMOLMapLoad.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk creating build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/startup copying modules/pmg_tk/startup/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/startup copying modules/pmg_tk/startup/remote_pdb_load.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/startup copying modules/pmg_tk/startup/apbs_tools.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/startup creating build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/skins copying modules/pmg_tk/skins/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/skins creating build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/SimpleColorChooser.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/builder.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/volume.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/ColorRampModel.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/ColorMap.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/ModalWindow.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/hist.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_tk/skins/normal creating build/lib.netbsd-9.99.67-amd64-2.7/pmg_wx copying modules/pmg_wx/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/pmg_wx creating build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/creating.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/completing.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/cgo.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/experimenting.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/xwin.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/povray.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/helping.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/constants_palette.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/computing.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/vfont.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/selector.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/util.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/gui.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/xray.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/selecting.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/fitting.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/editing.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/headering.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/callback.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/invocation.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/keyboard.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/preset.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/colorramping.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/m4x.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/exporting.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/parsing.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/moving.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/querying.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/constants.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/internal.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/editor.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/rpc.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/keywords.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/shortcut.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/importing.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/commanding.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/externing.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/setting.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/feedingback.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/locking.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/menu.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/cmd.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/checking.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/wizarding.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/viewing.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/monitoring.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/movie.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/parser.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/controlling.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol copying modules/pymol/api.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol creating build/lib.netbsd-9.99.67-amd64-2.7/pymol/contrib copying modules/pymol/contrib/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/contrib creating build/lib.netbsd-9.99.67-amd64-2.7/pymol/opengl copying modules/pymol/opengl/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/opengl creating build/lib.netbsd-9.99.67-amd64-2.7/pymol/opengl/gl copying modules/pymol/opengl/gl/glconst.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/opengl/gl copying modules/pymol/opengl/gl/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/opengl/gl creating build/lib.netbsd-9.99.67-amd64-2.7/pymol/opengl/glu copying modules/pymol/opengl/glu/gluconst.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/opengl/glu copying modules/pymol/opengl/glu/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/opengl/glu creating build/lib.netbsd-9.99.67-amd64-2.7/pymol/opengl/glut copying modules/pymol/opengl/glut/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/opengl/glut copying modules/pymol/opengl/glut/glutconst.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/opengl/glut creating build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/mutagenesis.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/measurement.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/benchmark.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/dragging.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/pair_fit.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/annotation.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/fedora.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/density.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/pseudoatom.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/label.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/stereodemo.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/toggle.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/cleanup.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/security.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/charge.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/box.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/distance.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/sculpting.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/demo.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/renaming.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/message.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/appearance.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard copying modules/pymol/wizard/filter.py -> build/lib.netbsd-9.99.67-amd64-2.7/pymol/wizard creating build/lib.netbsd-9.99.67-amd64-2.7/web copying modules/web/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/web copying modules/web/pymolhttpd.py -> build/lib.netbsd-9.99.67-amd64-2.7/web creating build/lib.netbsd-9.99.67-amd64-2.7/web/examples copying modules/web/examples/justhttpd.py -> build/lib.netbsd-9.99.67-amd64-2.7/web/examples copying modules/web/examples/__init__.py -> build/lib.netbsd-9.99.67-amd64-2.7/web/examples package init file 'modules/web/javascript/__init__.py' not found (or not a regular file) package init file 'modules/web/javascript/__init__.py' not found (or not a regular file) running build_ext building 'pymol._cmd' extension creating build/temp.netbsd-9.99.67-amd64-2.7 creating build/temp.netbsd-9.99.67-amd64-2.7/modules creating build/temp.netbsd-9.99.67-amd64-2.7/modules/cealign creating build/temp.netbsd-9.99.67-amd64-2.7/modules/cealign/src creating build/temp.netbsd-9.99.67-amd64-2.7/generated creating build/temp.netbsd-9.99.67-amd64-2.7/generated/src creating build/temp.netbsd-9.99.67-amd64-2.7/ov creating build/temp.netbsd-9.99.67-amd64-2.7/ov/src creating build/temp.netbsd-9.99.67-amd64-2.7/layer0 creating build/temp.netbsd-9.99.67-amd64-2.7/layer1 creating build/temp.netbsd-9.99.67-amd64-2.7/layer2 creating build/temp.netbsd-9.99.67-amd64-2.7/layer3 creating build/temp.netbsd-9.99.67-amd64-2.7/layer4 creating build/temp.netbsd-9.99.67-amd64-2.7/layer5 clang -fno-strict-aliasing -OPT:Olimit=0 -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -DNDEBUG -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_CGO_DRAWARRAYS -D_PYMOL_GL_CALLLISTS -DOPENGL_ES_2 -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -Igenerated/include -Igenerated/src -I/usr/pkg/include/python2.7 -c modules/cealign/src/ccealignmodule.cpp -o build/temp.netbsd-9.99.67-amd64-2.7/modules/cealign/src/ccealignmodule.o -ffast-math -funroll-loops -O3 -g In file included from modules/cealign/src/ccealignmodule.cpp:32: In file included from modules/cealign/src/ccealignmodule.H:34: In file included from layer0/os_python.h:28: In file included from /data/scratch/biology/py-mol/work/.buildlink/include/python2.7/Python.h:88: /data/scratch/biology/py-mol/work/.buildlink/include/python2.7/unicodeobject.h:534:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* Object */ ^~~~~~~~~ /data/scratch/biology/py-mol/work/.buildlink/include/python2.7/unicodeobject.h:553:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj /* Object */ ^~~~~~~~~ /data/scratch/biology/py-mol/work/.buildlink/include/python2.7/unicodeobject.h:575:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register const wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ /data/scratch/biology/py-mol/work/.buildlink/include/python2.7/unicodeobject.h:593:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register wchar_t *w, /* wchar_t buffer */ ^~~~~~~~~ In file included from modules/cealign/src/ccealignmodule.cpp:32: In file included from modules/cealign/src/ccealignmodule.H:34: In file included from layer0/os_python.h:28: In file included from /data/scratch/biology/py-mol/work/.buildlink/include/python2.7/Python.h:97: /data/scratch/biology/py-mol/work/.buildlink/include/python2.7/stringobject.h:173:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register PyObject *obj, /* string or Unicode object */ ^~~~~~~~~ /data/scratch/biology/py-mol/work/.buildlink/include/python2.7/stringobject.h:174:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register char **s, /* pointer to buffer variable */ ^~~~~~~~~ /data/scratch/biology/py-mol/work/.buildlink/include/python2.7/stringobject.h:175:5: warning: 'register' storage class specifier is deprecated and incompatible with C++17 [-Wdeprecated-register] register Py_ssize_t *len /* pointer to length variable or NULL ^~~~~~~~~ 7 warnings generated. clang -fno-strict-aliasing -OPT:Olimit=0 -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -DNDEBUG -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_CGO_DRAWARRAYS -D_PYMOL_GL_CALLLISTS -DOPENGL_ES_2 -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -Igenerated/include -Igenerated/src -I/usr/pkg/include/python2.7 -c generated/src/ShaderText.c -o build/temp.netbsd-9.99.67-amd64-2.7/generated/src/ShaderText.o -ffast-math -funroll-loops -O3 -g clang -fno-strict-aliasing -OPT:Olimit=0 -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -DNDEBUG -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_CGO_DRAWARRAYS -D_PYMOL_GL_CALLLISTS -DOPENGL_ES_2 -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -Igenerated/include -Igenerated/src -I/usr/pkg/include/python2.7 -c ov/src/OVContext.c -o build/temp.netbsd-9.99.67-amd64-2.7/ov/src/OVContext.o -ffast-math -funroll-loops -O3 -g clang -fno-strict-aliasing -OPT:Olimit=0 -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -DNDEBUG -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_CGO_DRAWARRAYS -D_PYMOL_GL_CALLLISTS -DOPENGL_ES_2 -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -Igenerated/include -Igenerated/src -I/usr/pkg/include/python2.7 -c ov/src/OVHeapArray.c -o build/temp.netbsd-9.99.67-amd64-2.7/ov/src/OVHeapArray.o -ffast-math -funroll-loops -O3 -g clang -fno-strict-aliasing -OPT:Olimit=0 -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -DNDEBUG -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_CGO_DRAWARRAYS -D_PYMOL_GL_CALLLISTS -DOPENGL_ES_2 -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -Igenerated/include -Igenerated/src -I/usr/pkg/include/python2.7 -c ov/src/OVHeap.c -o build/temp.netbsd-9.99.67-amd64-2.7/ov/src/OVHeap.o -ffast-math -funroll-loops -O3 -g clang -fno-strict-aliasing -OPT:Olimit=0 -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -DNDEBUG -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_CGO_DRAWARRAYS -D_PYMOL_GL_CALLLISTS -DOPENGL_ES_2 -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -Igenerated/include -Igenerated/src -I/usr/pkg/include/python2.7 -c ov/src/OVLexicon.c -o build/temp.netbsd-9.99.67-amd64-2.7/ov/src/OVLexicon.o -ffast-math -funroll-loops -O3 -g clang -fno-strict-aliasing -OPT:Olimit=0 -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -DNDEBUG -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_CGO_DRAWARRAYS -D_PYMOL_GL_CALLLISTS -DOPENGL_ES_2 -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -Igenerated/include -Igenerated/src -I/usr/pkg/include/python2.7 -c ov/src/OVOneToOne.c -o build/temp.netbsd-9.99.67-amd64-2.7/ov/src/OVOneToOne.o -ffast-math -funroll-loops -O3 -g clang -fno-strict-aliasing -OPT:Olimit=0 -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -DNDEBUG -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_CGO_DRAWARRAYS -D_PYMOL_GL_CALLLISTS -DOPENGL_ES_2 -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -Igenerated/include -Igenerated/src -I/usr/pkg/include/python2.7 -c ov/src/OVOneToAny.c -o build/temp.netbsd-9.99.67-amd64-2.7/ov/src/OVOneToAny.o -ffast-math -funroll-loops -O3 -g clang -fno-strict-aliasing -OPT:Olimit=0 -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -DNDEBUG -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_CGO_DRAWARRAYS -D_PYMOL_GL_CALLLISTS -DOPENGL_ES_2 -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -Igenerated/include -Igenerated/src -I/usr/pkg/include/python2.7 -c ov/src/OVRandom.c -o build/temp.netbsd-9.99.67-amd64-2.7/ov/src/OVRandom.o -ffast-math -funroll-loops -O3 -g clang -fno-strict-aliasing -OPT:Olimit=0 -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -DNDEBUG -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_CGO_DRAWARRAYS -D_PYMOL_GL_CALLLISTS -DOPENGL_ES_2 -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -Igenerated/include -Igenerated/src -I/usr/pkg/include/python2.7 -c ov/src/ov_utility.c -o build/temp.netbsd-9.99.67-amd64-2.7/ov/src/ov_utility.o -ffast-math -funroll-loops -O3 -g clang -fno-strict-aliasing -OPT:Olimit=0 -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -DNDEBUG -O2 -fwrapv -pthread -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -I/usr/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include -I/usr/pkg/include/libdrm -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -D_PYMOL_CGO_DRAWARRAYS -D_PYMOL_CGO_DRAWBUFFERS -D_CGO_DRAWARRAYS -D_PYMOL_GL_CALLLISTS -DOPENGL_ES_2 -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -Igenerated/include -Igenerated/src -I/usr/pkg/include/python2.7 -c layer0/Block.c -o build/temp.netbsd-9.99.67-amd64-2.7/layer0/Block.o -ffast-math -funroll-loops -O3 -g In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12306:25: error: typedef redefinition with different types ('void (*)(GLenum, GLenum, const GLfloat *)' (aka 'void (*)(unsigned int, unsigned int, const float *)') vs 'void (*)(GLenum, GLenum, GLfloat *)' (aka 'void (*)(unsigned int, unsigned int, float *)')) typedef void (APIENTRYP PFNGLFRAGMENTLIGHTFVSGIXPROC) (GLenum light, GLenum pname, const GLfloat *params); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18734:28: note: previous definition is here typedef void (GLAPIENTRY * PFNGLFRAGMENTLIGHTFVSGIXPROC) (GLenum light, GLenum pname, GLfloat* params); ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12308:25: error: typedef redefinition with different types ('void (*)(GLenum, GLenum, const GLint *)' (aka 'void (*)(unsigned int, unsigned int, const int *)') vs 'void (*)(GLenum, GLenum, GLint *)' (aka 'void (*)(unsigned int, unsigned int, int *)')) typedef void (APIENTRYP PFNGLFRAGMENTLIGHTIVSGIXPROC) (GLenum light, GLenum pname, const GLint *params); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18736:28: note: previous definition is here typedef void (GLAPIENTRY * PFNGLFRAGMENTLIGHTIVSGIXPROC) (GLenum light, GLenum pname, GLint* params); ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12310:25: error: typedef redefinition with different types ('void (*)(GLenum, const GLfloat *)' (aka 'void (*)(unsigned int, const float *)') vs 'void (*)(GLenum, GLfloat *)' (aka 'void (*)(unsigned int, float *)')) typedef void (APIENTRYP PFNGLFRAGMENTLIGHTMODELFVSGIXPROC) (GLenum pname, const GLfloat *params); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18730:28: note: previous definition is here typedef void (GLAPIENTRY * PFNGLFRAGMENTLIGHTMODELFVSGIXPROC) (GLenum pname, GLfloat* params); ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12312:25: error: typedef redefinition with different types ('void (*)(GLenum, const GLint *)' (aka 'void (*)(unsigned int, const int *)') vs 'void (*)(GLenum, GLint *)' (aka 'void (*)(unsigned int, int *)')) typedef void (APIENTRYP PFNGLFRAGMENTLIGHTMODELIVSGIXPROC) (GLenum pname, const GLint *params); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18732:28: note: previous definition is here typedef void (GLAPIENTRY * PFNGLFRAGMENTLIGHTMODELIVSGIXPROC) (GLenum pname, GLint* params); ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12319:25: error: typedef redefinition with different types ('void (*)(GLenum, GLenum, GLfloat *)' (aka 'void (*)(unsigned int, unsigned int, float *)') vs 'void (*)(GLenum, GLenum, const GLfloat *)' (aka 'void (*)(unsigned int, unsigned int, const float *)')) typedef void (APIENTRYP PFNGLGETFRAGMENTMATERIALFVSGIXPROC) (GLenum face, GLenum pname, GLfloat *params); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18743:28: note: previous definition is here typedef void (GLAPIENTRY * PFNGLGETFRAGMENTMATERIALFVSGIXPROC) (GLenum face, GLenum pname, const GLfloat* data); ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12320:25: error: typedef redefinition with different types ('void (*)(GLenum, GLenum, GLint *)' (aka 'void (*)(unsigned int, unsigned int, int *)') vs 'void (*)(GLenum, GLenum, const GLint *)' (aka 'void (*)(unsigned int, unsigned int, const int *)')) typedef void (APIENTRYP PFNGLGETFRAGMENTMATERIALIVSGIXPROC) (GLenum face, GLenum pname, GLint *params); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18744:28: note: previous definition is here typedef void (GLAPIENTRY * PFNGLGETFRAGMENTMATERIALIVSGIXPROC) (GLenum face, GLenum pname, const GLint* data); ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12323:21: error: redefinition of '__glewFragmentColorMaterialSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentColorMaterialSGIX (GLenum face, GLenum mode); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18746:50: note: expanded from macro 'glFragmentColorMaterialSGIX' #define glFragmentColorMaterialSGIX GLEW_GET_FUN(__glewFragmentColorMaterialSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22672:52: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTCOLORMATERIALSGIXPROC __glewFragmentColorMaterialSGIX; ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12324:21: error: redefinition of '__glewFragmentLightfSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentLightfSGIX (GLenum light, GLenum pname, GLfloat param); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18751:43: note: expanded from macro 'glFragmentLightfSGIX' #define glFragmentLightfSGIX GLEW_GET_FUN(__glewFragmentLightfSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22677:45: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTLIGHTFSGIXPROC __glewFragmentLightfSGIX; ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12325:21: error: redefinition of '__glewFragmentLightfvSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentLightfvSGIX (GLenum light, GLenum pname, const GLfloat *params); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18752:44: note: expanded from macro 'glFragmentLightfvSGIX' #define glFragmentLightfvSGIX GLEW_GET_FUN(__glewFragmentLightfvSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22678:46: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTLIGHTFVSGIXPROC __glewFragmentLightfvSGIX; ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12326:21: error: redefinition of '__glewFragmentLightiSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentLightiSGIX (GLenum light, GLenum pname, GLint param); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18753:43: note: expanded from macro 'glFragmentLightiSGIX' #define glFragmentLightiSGIX GLEW_GET_FUN(__glewFragmentLightiSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22679:45: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTLIGHTISGIXPROC __glewFragmentLightiSGIX; ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12327:21: error: redefinition of '__glewFragmentLightivSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentLightivSGIX (GLenum light, GLenum pname, const GLint *params); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18754:44: note: expanded from macro 'glFragmentLightivSGIX' #define glFragmentLightivSGIX GLEW_GET_FUN(__glewFragmentLightivSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22680:46: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTLIGHTIVSGIXPROC __glewFragmentLightivSGIX; ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12328:21: error: redefinition of '__glewFragmentLightModelfSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentLightModelfSGIX (GLenum pname, GLfloat param); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18747:48: note: expanded from macro 'glFragmentLightModelfSGIX' #define glFragmentLightModelfSGIX GLEW_GET_FUN(__glewFragmentLightModelfSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22673:50: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTLIGHTMODELFSGIXPROC __glewFragmentLightModelfSGIX; ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12329:21: error: redefinition of '__glewFragmentLightModelfvSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentLightModelfvSGIX (GLenum pname, const GLfloat *params); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18748:49: note: expanded from macro 'glFragmentLightModelfvSGIX' #define glFragmentLightModelfvSGIX GLEW_GET_FUN(__glewFragmentLightModelfvSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22674:51: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTLIGHTMODELFVSGIXPROC __glewFragmentLightModelfvSGIX; ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12330:21: error: redefinition of '__glewFragmentLightModeliSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentLightModeliSGIX (GLenum pname, GLint param); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18749:48: note: expanded from macro 'glFragmentLightModeliSGIX' #define glFragmentLightModeliSGIX GLEW_GET_FUN(__glewFragmentLightModeliSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22675:50: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTLIGHTMODELISGIXPROC __glewFragmentLightModeliSGIX; ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12331:21: error: redefinition of '__glewFragmentLightModelivSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentLightModelivSGIX (GLenum pname, const GLint *params); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18750:49: note: expanded from macro 'glFragmentLightModelivSGIX' #define glFragmentLightModelivSGIX GLEW_GET_FUN(__glewFragmentLightModelivSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22676:51: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTLIGHTMODELIVSGIXPROC __glewFragmentLightModelivSGIX; ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12332:21: error: redefinition of '__glewFragmentMaterialfSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentMaterialfSGIX (GLenum face, GLenum pname, GLfloat param); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18755:46: note: expanded from macro 'glFragmentMaterialfSGIX' #define glFragmentMaterialfSGIX GLEW_GET_FUN(__glewFragmentMaterialfSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22681:48: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTMATERIALFSGIXPROC __glewFragmentMaterialfSGIX; ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12333:21: error: redefinition of '__glewFragmentMaterialfvSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentMaterialfvSGIX (GLenum face, GLenum pname, const GLfloat *params); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18756:47: note: expanded from macro 'glFragmentMaterialfvSGIX' #define glFragmentMaterialfvSGIX GLEW_GET_FUN(__glewFragmentMaterialfvSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22682:49: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTMATERIALFVSGIXPROC __glewFragmentMaterialfvSGIX; ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12334:21: error: redefinition of '__glewFragmentMaterialiSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentMaterialiSGIX (GLenum face, GLenum pname, GLint param); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18757:46: note: expanded from macro 'glFragmentMaterialiSGIX' #define glFragmentMaterialiSGIX GLEW_GET_FUN(__glewFragmentMaterialiSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22683:48: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTMATERIALISGIXPROC __glewFragmentMaterialiSGIX; ^ In file included from layer0/Block.c:20: In file included from layer0/os_gl.h:83: /data/scratch/biology/py-mol/work/.buildlink/include/GL/glext.h:12335:21: error: redefinition of '__glewFragmentMaterialivSGIX' as different kind of symbol GLAPI void APIENTRY glFragmentMaterialivSGIX (GLenum face, GLenum pname, const GLint *params); ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:18758:47: note: expanded from macro 'glFragmentMaterialivSGIX' #define glFragmentMaterialivSGIX GLEW_GET_FUN(__glewFragmentMaterialivSGIX) ^ /data/scratch/biology/py-mol/work/.buildlink/include/GL/glew.h:22684:49: note: previous definition is here GLEW_FUN_EXPORT PFNGLFRAGMENTMATERIALIVSGIXPROC __glewFragmentMaterialivSGIX; ^ fatal error: too many errors emitted, stopping now [-ferror-limit=] 20 errors generated. error: command 'clang' failed with exit status 1 *** Error code 1 Stop. make[1]: stopped in /data/pkgsrc/biology/py-mol *** Error code 1 Stop. make: stopped in /data/pkgsrc/biology/py-mol